Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.29■□□□□ 0.2
RLIMQ9NVW2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AC105020.1-201ENST00000435356 2205 ntBASIC16.29■□□□□ 0.2
RLIMQ9NVW2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 LINC01238-205ENST00000567549 1107 ntBASIC16.29■□□□□ 0.2
RLIMQ9NVW2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.29■□□□□ 0.2
RLIMQ9NVW2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 PCDHA14-201ENST00000506751 2298 ntBASIC16.28■□□□□ 0.2
RLIMQ9NVW2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 TSPY22P-201ENST00000427496 604 ntBASIC16.28■□□□□ 0.2
RLIMQ9NVW2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.28■□□□□ 0.2
RLIMQ9NVW2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RLIMQ9NVW2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 AC011498.5-201ENST00000592027 486 ntBASIC16.27■□□□□ 0.2
RLIMQ9NVW2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RLIMQ9NVW2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RLIMQ9NVW2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms