Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 BCRP1-201ENST00000444246 691 ntBASIC18.44■□□□□ 0.54
TLR9Q9NR96 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 AC025678.2-201ENST00000562061 970 ntBASIC18.44■□□□□ 0.54
TLR9Q9NR96 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 AC022145.2-201ENST00000598203 171 ntBASIC18.44■□□□□ 0.54
TLR9Q9NR96 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
TLR9Q9NR96 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR9Q9NR96 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 AC023141.5-201ENST00000458585 616 ntBASIC18.43■□□□□ 0.54
TLR9Q9NR96 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 AL590787.1-201ENST00000568856 1315 ntBASIC18.43■□□□□ 0.54
TLR9Q9NR96 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TLR9Q9NR96 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR9Q9NR96 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 AL121761.2-201ENST00000598007 1648 ntBASIC18.42■□□□□ 0.54
TLR9Q9NR96 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TLR9Q9NR96 WIZP1-201ENST00000531444 2299 ntBASIC18.42■□□□□ 0.54
TLR9Q9NR96 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR9Q9NR96 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 FAM185BP-201ENST00000443595 716 ntBASIC18.41■□□□□ 0.54
TLR9Q9NR96 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 AC112191.1-201ENST00000523689 701 ntBASIC18.41■□□□□ 0.54
TLR9Q9NR96 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms