Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.33■□□□□ 0.37
SSU72Q9NP77 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSU72Q9NP77 EGFEM1P-202ENST00000431685 1563 ntBASIC17.33■□□□□ 0.37
SSU72Q9NP77 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSU72Q9NP77 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 HMGA1P5-201ENST00000412453 271 ntBASIC17.33■□□□□ 0.36
SSU72Q9NP77 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.33■□□□□ 0.36
SSU72Q9NP77 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSU72Q9NP77 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PRORSD1P-201ENST00000295112 541 ntBASIC17.32■□□□□ 0.36
SSU72Q9NP77 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 MTCL1P1-201ENST00000446207 792 ntBASIC17.32■□□□□ 0.36
SSU72Q9NP77 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 FAM87A-204ENST00000613235 858 ntBASIC17.32■□□□□ 0.36
SSU72Q9NP77 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
SSU72Q9NP77 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSU72Q9NP77 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 AL391807.1-203ENST00000604392 2365 ntBASIC17.31■□□□□ 0.36
SSU72Q9NP77 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 KRT18P48-201ENST00000434763 852 ntBASIC17.31■□□□□ 0.36
SSU72Q9NP77 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 GCSHP5-201ENST00000443090 522 ntBASIC17.31■□□□□ 0.36
SSU72Q9NP77 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 Z99916.2-201ENST00000604037 246 ntBASIC17.31■□□□□ 0.36
SSU72Q9NP77 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSU72Q9NP77 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.31■□□□□ 0.36
SSU72Q9NP77 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSU72Q9NP77 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.3■□□□□ 0.36
SSU72Q9NP77 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.3■□□□□ 0.36
SSU72Q9NP77 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSU72Q9NP77 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.3■□□□□ 0.36
SSU72Q9NP77 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms