Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF3Q9HD45 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF3Q9HD45 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
TM9SF3Q9HD45 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.47■□□□□ 0.39
TM9SF3Q9HD45 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 AL020989.1-201ENST00000422979 469 ntBASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 AC079781.4-201ENST00000641908 219 ntBASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF3Q9HD45 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TM9SF3Q9HD45 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 MTDHP5-201ENST00000598980 586 ntBASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 AC134684.3-201ENST00000641758 218 ntBASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 FZD10-202ENST00000539839 3282 ntBASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF3Q9HD45 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 AL353593.2-201ENST00000602529 1483 ntBASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF3Q9HD45 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms