Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC046158.3-201ENST00000624947 2558 ntBASIC17.59■□□□□ 0.41
VPS11Q9H270 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VPS11Q9H270 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS11Q9H270 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS11Q9H270 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
VPS11Q9H270 TSPY12P-201ENST00000421279 868 ntBASIC17.59■□□□□ 0.41
VPS11Q9H270 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.59■□□□□ 0.41
VPS11Q9H270 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VPS11Q9H270 FER1L4-210ENST00000615531 5998 ntBASIC17.59■□□□□ 0.41
VPS11Q9H270 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS11Q9H270 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS11Q9H270 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS11Q9H270 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
VPS11Q9H270 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS11Q9H270 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS11Q9H270 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.59■□□□□ 0.41
VPS11Q9H270 AL139384.1-201ENST00000612143 3047 ntBASIC17.58■□□□□ 0.41
VPS11Q9H270 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 AC116353.5-201ENST00000638148 1699 ntBASIC17.58■□□□□ 0.41
VPS11Q9H270 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS11Q9H270 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 BX276092.7-203ENST00000637198 1536 ntBASIC17.58■□□□□ 0.41
VPS11Q9H270 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS11Q9H270 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 AC009154.2-201ENST00000621177 724 ntBASIC17.58■□□□□ 0.4
VPS11Q9H270 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VPS11Q9H270 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS11Q9H270 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS11Q9H270 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS11Q9H270 LYSMD4-203ENST00000378904 2122 ntBASIC17.57■□□□□ 0.4
VPS11Q9H270 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VPS11Q9H270 DOC2GP-204ENST00000639052 2548 ntBASIC17.57■□□□□ 0.4
VPS11Q9H270 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS11Q9H270 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VPS11Q9H270 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 AC112698.1-201ENST00000510299 916 ntBASIC17.57■□□□□ 0.4
VPS11Q9H270 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS11Q9H270 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS11Q9H270 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS11Q9H270 PCDH8P1-201ENST00000428983 2773 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms