Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1EQ9GZS1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.71■□□□□ 0.42
POLR1EQ9GZS1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
POLR1EQ9GZS1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
POLR1EQ9GZS1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 LETM1P2-201ENST00000597330 2178 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 CROCCP2-202ENST00000412962 2773 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 AC026471.1-201ENST00000564629 3026 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 SAPCD2P3-201ENST00000455031 850 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 AC073592.4-201ENST00000623827 446 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 FZD10-202ENST00000539839 3282 ntBASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
POLR1EQ9GZS1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 AC079776.2-201ENST00000641154 1609 ntBASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 AC141586.5-201ENST00000624546 2050 ntBASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
POLR1EQ9GZS1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 AKR1C7P-201ENST00000305623 895 ntBASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 MTDHP3-201ENST00000594186 672 ntBASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 AC008608.2-201ENST00000606089 416 ntBASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 AL355877.3-201ENST00000622820 899 ntBASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 AL139288.1-201ENST00000623748 933 ntBASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1EQ9GZS1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms