Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 AC010654.1-201ENST00000615722 808 ntBASIC18.18■□□□□ 0.5
LRRC3Q9BY71 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC3Q9BY71 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 AC005332.8-201ENST00000622750 2735 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 MRPL20P1-201ENST00000400819 433 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 ACTG1P4-201ENST00000425123 1122 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 ALG1L5P-201ENST00000482043 771 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 AC018470.1-201ENST00000624790 3129 ntBASIC18.17■□□□□ 0.5
LRRC3Q9BY71 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC3Q9BY71 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AC138028.4-201ENST00000564984 1845 ntBASIC18.16■□□□□ 0.5
LRRC3Q9BY71 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AP006288.1-201ENST00000446065 395 ntBASIC18.16■□□□□ 0.5
LRRC3Q9BY71 DNAJB3-202ENST00000449667 1266 ntBASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AL590787.1-201ENST00000568856 1315 ntBASIC18.16■□□□□ 0.5
LRRC3Q9BY71 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC3Q9BY71 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 RHOQP3-201ENST00000437982 621 ntBASIC18.15■□□□□ 0.5
LRRC3Q9BY71 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 AC005829.1-201ENST00000570002 483 ntBASIC18.15■□□□□ 0.5
LRRC3Q9BY71 GGTLC5P-201ENST00000617623 998 ntBASIC18.15■□□□□ 0.5
LRRC3Q9BY71 AC010507.1-201ENST00000633895 436 ntBASIC18.15■□□□□ 0.5
LRRC3Q9BY71 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms