Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 KRT8P10-201ENST00000450021 1447 ntBASIC12.19□□□□□ -0.46
UPK3BQ9BT76 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UPK3BQ9BT76 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC090164.3-201ENST00000610780 2143 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC007967.3-201ENST00000434308 558 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 ABCD1P5-201ENST00000445663 754 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 FDX1P1-201ENST00000449115 551 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC132008.2-207ENST00000454517 770 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 SCARNA2-201ENST00000458748 420 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AP002469.2-201ENST00000531724 424 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC008608.2-201ENST00000606089 416 ntBASIC12.17□□□□□ -0.46
UPK3BQ9BT76 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK3BQ9BT76 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms