Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 AC113410.3-201ENST00000623366 203 ntBASIC14.19□□□□□ -0.14
RAB40CQ96S21 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40CQ96S21 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40CQ96S21 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 BX088651.1-201ENST00000540551 451 ntBASIC14.18□□□□□ -0.14
RAB40CQ96S21 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 KRT8P47-201ENST00000604727 1398 ntBASIC14.18□□□□□ -0.14
RAB40CQ96S21 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40CQ96S21 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40CQ96S21 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40CQ96S21 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40CQ96S21 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms