Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 PRYP5-201ENST00000451909 266 ntBASIC18.42■□□□□ 0.54
GCNAQ96QF7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 AL356488.2-201ENST00000602755 427 ntBASIC18.42■□□□□ 0.54
GCNAQ96QF7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 FAM197Y3-203ENST00000618346 717 ntBASIC18.42■□□□□ 0.54
GCNAQ96QF7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GCNAQ96QF7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GCNAQ96QF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 AL353593.2-201ENST00000602529 1483 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 MIR1233-2-201ENST00000408138 82 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 MIR1233-1-201ENST00000408722 82 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 DDX43P3-201ENST00000441064 443 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 IGHV3-52-201ENST00000519770 353 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 AC140113.2-201ENST00000604370 208 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 AC135776.1-201ENST00000319817 2481 ntBASIC18.41■□□□□ 0.54
GCNAQ96QF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GCNAQ96QF7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
GCNAQ96QF7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AC034105.1-201ENST00000563488 319 ntBASIC18.4■□□□□ 0.54
GCNAQ96QF7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 AL589182.2-201ENST00000619332 1049 ntBASIC18.4■□□□□ 0.54
GCNAQ96QF7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.4■□□□□ 0.54
GCNAQ96QF7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GCNAQ96QF7 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.39■□□□□ 0.54
GCNAQ96QF7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GCNAQ96QF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GCNAQ96QF7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GCNAQ96QF7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms