Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC138932.2-201ENST00000548268 1459 ntBASIC18.8■□□□□ 0.6
ALPK3Q96L96 AC126755.4-201ENST00000549796 1459 ntBASIC18.8■□□□□ 0.6
ALPK3Q96L96 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.8■□□□□ 0.6
ALPK3Q96L96 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 AC002558.1-201ENST00000488906 803 ntBASIC18.79■□□□□ 0.6
ALPK3Q96L96 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALPK3Q96L96 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.79■□□□□ 0.6
ALPK3Q96L96 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 FAM86MP-201ENST00000340703 885 ntBASIC18.78■□□□□ 0.6
ALPK3Q96L96 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC027307.2-201ENST00000591252 911 ntBASIC18.78■□□□□ 0.6
ALPK3Q96L96 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC004945.1-201ENST00000416738 983 ntBASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ALPK3Q96L96 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALPK3Q96L96 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ALPK3Q96L96 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.77■□□□□ 0.6
ALPK3Q96L96 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 RN7SL837P-201ENST00000463010 287 ntBASIC18.77■□□□□ 0.6
ALPK3Q96L96 AC092658.1-201ENST00000505836 891 ntBASIC18.77■□□□□ 0.6
ALPK3Q96L96 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ALPK3Q96L96 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.77■□□□□ 0.6
ALPK3Q96L96 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.77■□□□□ 0.6
ALPK3Q96L96 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALPK3Q96L96 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ALPK3Q96L96 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ALPK3Q96L96 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ALPK3Q96L96 AL135999.2-201ENST00000622438 1686 ntBASIC18.77■□□□□ 0.59
ALPK3Q96L96 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 MYCLP1-201ENST00000372451 1075 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 MIR658-201ENST00000385210 100 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 IGHV3-62-201ENST00000520057 340 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.76■□□□□ 0.59
ALPK3Q96L96 MIR4525-201ENST00000580000 75 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 AL844908.2-201ENST00000609461 460 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 AC008267.7-201ENST00000624570 1194 ntBASIC18.76■□□□□ 0.59
ALPK3Q96L96 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALPK3Q96L96 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms