Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 AC005336.2-201ENST00000593183 939 ntBASIC15.79■□□□□ 0.12
LRRC46Q96FV0 AL138831.2-201ENST00000606564 490 ntBASIC15.79■□□□□ 0.12
LRRC46Q96FV0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC46Q96FV0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 INTS4P1-201ENST00000438455 1935 ntBASIC15.78■□□□□ 0.12
LRRC46Q96FV0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 TERC-201ENST00000602385 541 ntBASIC15.78■□□□□ 0.12
LRRC46Q96FV0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC46Q96FV0 AC125634.1-201ENST00000438758 1403 ntBASIC15.77■□□□□ 0.12
LRRC46Q96FV0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.77■□□□□ 0.12
LRRC46Q96FV0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 ABCD1P5-201ENST00000445663 754 ntBASIC15.77■□□□□ 0.12
LRRC46Q96FV0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 FGFR3P6-201ENST00000457012 610 ntBASIC15.77■□□□□ 0.12
LRRC46Q96FV0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC46Q96FV0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC46Q96FV0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LRRC46Q96FV0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC46Q96FV0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC46Q96FV0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC46Q96FV0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms