Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 FLJ38576-201ENST00000623820 2459 ntBASIC15.72■□□□□ 0.11
PTP4A1Q93096 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 PCDHA14-201ENST00000506751 2298 ntBASIC15.72■□□□□ 0.11
PTP4A1Q93096 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A1Q93096 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A1Q93096 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 MIR662-201ENST00000384847 95 ntBASIC15.71■□□□□ 0.11
PTP4A1Q93096 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 AP003733.1-201ENST00000491725 852 ntBASIC15.71■□□□□ 0.11
PTP4A1Q93096 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PTP4A1Q93096 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A1Q93096 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A1Q93096 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A1Q93096 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A1Q93096 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A1Q93096 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.71■□□□□ 0.1
PTP4A1Q93096 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.71■□□□□ 0.1
PTP4A1Q93096 AC097374.2-201ENST00000618617 1306 ntBASIC15.7■□□□□ 0.1
PTP4A1Q93096 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 AC022616.7-201ENST00000525383 220 ntBASIC15.7■□□□□ 0.1
PTP4A1Q93096 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms