Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6NLQ92738 AL513480.1-201ENST00000451731 511 ntBASIC19.66■□□□□ 0.74
USP6NLQ92738 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 MIR4745-201ENST00000577608 62 ntBASIC19.66■□□□□ 0.74
USP6NLQ92738 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
USP6NLQ92738 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6NLQ92738 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP6NLQ92738 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
USP6NLQ92738 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.65■□□□□ 0.74
USP6NLQ92738 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP6NLQ92738 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.65■□□□□ 0.74
USP6NLQ92738 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.65■□□□□ 0.74
USP6NLQ92738 AC099522.2-201ENST00000607001 744 ntBASIC19.65■□□□□ 0.74
USP6NLQ92738 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP6NLQ92738 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 AIRN-201ENST00000601203 4374 ntBASIC19.65■□□□□ 0.74
USP6NLQ92738 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.65■□□□□ 0.74
USP6NLQ92738 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6NLQ92738 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.65■□□□□ 0.74
USP6NLQ92738 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.64■□□□□ 0.74
USP6NLQ92738 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6NLQ92738 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP6NLQ92738 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.64■□□□□ 0.74
USP6NLQ92738 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.64■□□□□ 0.74
USP6NLQ92738 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP6NLQ92738 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.64■□□□□ 0.73
USP6NLQ92738 AC092474.2-201ENST00000424288 719 ntBASIC19.64■□□□□ 0.73
USP6NLQ92738 SLC25A6P2-201ENST00000497974 877 ntBASIC19.64■□□□□ 0.73
USP6NLQ92738 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.64■□□□□ 0.73
USP6NLQ92738 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.64■□□□□ 0.73
USP6NLQ92738 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.64■□□□□ 0.73
USP6NLQ92738 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.64■□□□□ 0.73
USP6NLQ92738 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.64■□□□□ 0.73
USP6NLQ92738 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.64■□□□□ 0.73
USP6NLQ92738 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP6NLQ92738 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.64■□□□□ 0.73
USP6NLQ92738 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6NLQ92738 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP6NLQ92738 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6NLQ92738 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6NLQ92738 AC002056.1-201ENST00000395613 760 ntBASIC19.63■□□□□ 0.73
USP6NLQ92738 AL355306.1-201ENST00000415580 579 ntBASIC19.63■□□□□ 0.73
USP6NLQ92738 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6NLQ92738 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.63■□□□□ 0.73
USP6NLQ92738 FAM86GP-201ENST00000448322 971 ntBASIC19.63■□□□□ 0.73
USP6NLQ92738 KRT8P48-201ENST00000515599 1220 ntBASIC19.63■□□□□ 0.73
USP6NLQ92738 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6NLQ92738 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.63■□□□□ 0.73
USP6NLQ92738 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms