Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.84■□□□□ 0.61
UBXN4Q92575 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.84■□□□□ 0.61
UBXN4Q92575 CR392000.1-201ENST00000624770 1228 ntBASIC18.84■□□□□ 0.61
UBXN4Q92575 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.84■□□□□ 0.61
UBXN4Q92575 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.84■□□□□ 0.61
UBXN4Q92575 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UBXN4Q92575 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
UBXN4Q92575 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBXN4Q92575 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.84■□□□□ 0.61
UBXN4Q92575 NFIC-211ENST00000641145 8399 ntBASIC18.84■□□□□ 0.61
UBXN4Q92575 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBXN4Q92575 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBXN4Q92575 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.83■□□□□ 0.61
UBXN4Q92575 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.83■□□□□ 0.61
UBXN4Q92575 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.83■□□□□ 0.61
UBXN4Q92575 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.83■□□□□ 0.61
UBXN4Q92575 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.83■□□□□ 0.6
UBXN4Q92575 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UBXN4Q92575 AC211429.1-201ENST00000415277 523 ntBASIC18.83■□□□□ 0.6
UBXN4Q92575 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.83■□□□□ 0.6
UBXN4Q92575 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.83■□□□□ 0.6
UBXN4Q92575 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.83■□□□□ 0.6
UBXN4Q92575 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.83■□□□□ 0.6
UBXN4Q92575 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.83■□□□□ 0.6
UBXN4Q92575 LINC01023-201ENST00000606054 436 ntBASIC18.83■□□□□ 0.6
UBXN4Q92575 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
UBXN4Q92575 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBXN4Q92575 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBXN4Q92575 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBXN4Q92575 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBXN4Q92575 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.83■□□□□ 0.6
UBXN4Q92575 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
UBXN4Q92575 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.83■□□□□ 0.6
UBXN4Q92575 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBXN4Q92575 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.82■□□□□ 0.6
UBXN4Q92575 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
UBXN4Q92575 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBXN4Q92575 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBXN4Q92575 TSPY15P-201ENST00000457163 923 ntBASIC18.82■□□□□ 0.6
UBXN4Q92575 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.82■□□□□ 0.6
UBXN4Q92575 AL445675.2-201ENST00000620291 557 ntBASIC18.82■□□□□ 0.6
UBXN4Q92575 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBXN4Q92575 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
UBXN4Q92575 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBXN4Q92575 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN4Q92575 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN4Q92575 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
UBXN4Q92575 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN4Q92575 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.81■□□□□ 0.6
UBXN4Q92575 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
UBXN4Q92575 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN4Q92575 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN4Q92575 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN4Q92575 AL031985.4-201ENST00000642138 673 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms