Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX1Q92499 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DDX1Q92499 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX1Q92499 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX1Q92499 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 MIR574-201ENST00000385209 96 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX1Q92499 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 AC096582.2-201ENST00000510860 516 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 FOSL1P1-201ENST00000511041 816 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX1Q92499 AC092865.5-201ENST00000545435 363 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.57■□□□□ 0.56
DDX1Q92499 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 AC114341.1-201ENST00000618070 349 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX1Q92499 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX1Q92499 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX1Q92499 PRORSD1P-202ENST00000563365 2154 ntBASIC18.57■□□□□ 0.56
DDX1Q92499 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX1Q92499 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX1Q92499 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
DDX1Q92499 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
DDX1Q92499 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX1Q92499 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.56■□□□□ 0.56
DDX1Q92499 KRT18P58-201ENST00000527480 1120 ntBASIC18.56■□□□□ 0.56
DDX1Q92499 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.56■□□□□ 0.56
DDX1Q92499 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DDX1Q92499 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX1Q92499 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DDX1Q92499 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DDX1Q92499 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX1Q92499 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 PMPCAP1-201ENST00000508114 1576 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms