Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.68■□□□□ 0.58
LMO3Q8TAP4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 KRT18P31-201ENST00000506277 1292 ntBASIC18.67■□□□□ 0.58
LMO3Q8TAP4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO3Q8TAP4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LMO3Q8TAP4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 SIGLEC30P-201ENST00000455569 941 ntBASIC18.65■□□□□ 0.58
LMO3Q8TAP4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO3Q8TAP4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms