Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BBS1Q8NFJ9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 SLC25A1P3-201ENST00000395415 828 ntBASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 KRT18P48-201ENST00000434763 852 ntBASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 AC079328.2-201ENST00000561241 3354 ntBASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.74■□□□□ 0.11
BBS1Q8NFJ9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SPDYE15P-201ENST00000424157 909 ntBASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 TMEM191A-211ENST00000637163 1067 ntBASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 AC008894.3-201ENST00000624324 3103 ntBASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.73■□□□□ 0.11
BBS1Q8NFJ9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 LINC02012-201ENST00000608206 1725 ntBASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS1Q8NFJ9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms