Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 LYSMD4-203ENST00000378904 2122 ntBASIC15.3■□□□□ 0.04
CPEB3Q8NE35 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 AC020916.1-201ENST00000587762 1774 ntBASIC15.3■□□□□ 0.04
CPEB3Q8NE35 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 AL138688.1-201ENST00000624851 1594 ntBASIC15.29■□□□□ 0.04
CPEB3Q8NE35 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 KRT16P4-201ENST00000453883 522 ntBASIC15.29■□□□□ 0.04
CPEB3Q8NE35 IGHV3-52-201ENST00000519770 353 ntBASIC15.29■□□□□ 0.04
CPEB3Q8NE35 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPEB3Q8NE35 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 NFIC-211ENST00000641145 8399 ntBASIC15.28■□□□□ 0.04
CPEB3Q8NE35 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 AC141586.5-201ENST00000624546 2050 ntBASIC15.28■□□□□ 0.04
CPEB3Q8NE35 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 AC139713.2-201ENST00000641328 2723 ntBASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPEB3Q8NE35 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms