Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 AP001059.3-201ENST00000619053 235 ntBASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CFAP43Q8NDM7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 HLA-V-201ENST00000429037 534 ntBASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 AL139327.4-201ENST00000612362 153 ntBASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CFAP43Q8NDM7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 PTCHD3P3-201ENST00000403073 906 ntBASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 AC008761.3-201ENST00000624803 892 ntBASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 LYSMD4-203ENST00000378904 2122 ntBASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC27.03■■□□□ 1.92
CFAP43Q8NDM7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 TIMM8BP1-201ENST00000452384 211 ntBASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 AC008764.6-201ENST00000595909 2069 ntBASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC27.02■■□□□ 1.92
CFAP43Q8NDM7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 SLC25A6P5-201ENST00000435663 894 ntBASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 CRB3P1-201ENST00000449338 276 ntBASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CFAP43Q8NDM7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC27.01■■□□□ 1.91
CFAP43Q8NDM7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CFAP43Q8NDM7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
CFAP43Q8NDM7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CFAP43Q8NDM7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CFAP43Q8NDM7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms