Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf42Q8N5U0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf42Q8N5U0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
C11orf42Q8N5U0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf42Q8N5U0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
C11orf42Q8N5U0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
C11orf42Q8N5U0 AC068880.1-201ENST00000507289 2297 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 TP73-AS1-210ENST00000637775 1455 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 POM121L3P-201ENST00000419331 1163 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC007967.3-201ENST00000434308 558 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 DDX43P3-201ENST00000441064 443 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 CLEC4GP1-201ENST00000596555 870 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC116407.2-201ENST00000613639 860 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 AC012317.2-201ENST00000623305 2251 ntBASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf42Q8N5U0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 COX5BP2-201ENST00000392354 334 ntBASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 AC011467.2-201ENST00000598425 242 ntBASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 AC099336.1-202ENST00000602961 463 ntBASIC14.57□□□□□ -0.08
C11orf42Q8N5U0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms