Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 AC010460.2-201ENST00000509054 677 ntBASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 AC009088.1-201ENST00000565152 833 ntBASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 OR10AE1P-201ENST00000606962 1029 ntBASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00528Q8N1L1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 NUS1P1-201ENST00000446295 882 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 KRT17P6-201ENST00000453795 1220 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 UNC93B7-201ENST00000509439 705 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 MIR3917-201ENST00000580971 93 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 Z93930.3-201ENST00000607919 749 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AL121772.3-201ENST00000610840 674 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AL354696.1-201ENST00000614652 497 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 AC079602.3-201ENST00000623931 403 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00528Q8N1L1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 AL391807.1-203ENST00000604392 2365 ntBASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00528Q8N1L1 RNU4-40P-201ENST00000364351 143 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms