Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LDB1Q86U70 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB1Q86U70 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDB1Q86U70 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB1Q86U70 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
LDB1Q86U70 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LDB1Q86U70 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 RCN1P2-201ENST00000398357 915 ntBASIC17.44■□□□□ 0.38
LDB1Q86U70 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 AC122714.2-201ENST00000502787 707 ntBASIC17.44■□□□□ 0.38
LDB1Q86U70 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.44■□□□□ 0.38
LDB1Q86U70 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.44■□□□□ 0.38
LDB1Q86U70 AC092329.2-201ENST00000598402 547 ntBASIC17.44■□□□□ 0.38
LDB1Q86U70 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.44■□□□□ 0.38
LDB1Q86U70 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.44■□□□□ 0.38
LDB1Q86U70 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LDB1Q86U70 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.44■□□□□ 0.38
LDB1Q86U70 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB1Q86U70 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LDB1Q86U70 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 ATP5G2P1-201ENST00000433580 426 ntBASIC17.43■□□□□ 0.38
LDB1Q86U70 IGHV3-52-201ENST00000519770 353 ntBASIC17.43■□□□□ 0.38
LDB1Q86U70 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 AC011467.2-201ENST00000598425 242 ntBASIC17.43■□□□□ 0.38
LDB1Q86U70 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.43■□□□□ 0.38
LDB1Q86U70 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB1Q86U70 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB1Q86U70 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB1Q86U70 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
LDB1Q86U70 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.42■□□□□ 0.38
LDB1Q86U70 UPK3BP1-201ENST00000428678 509 ntBASIC17.42■□□□□ 0.38
LDB1Q86U70 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.42■□□□□ 0.38
LDB1Q86U70 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms