Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 AC109462.3-201ENST00000573934 613 ntBASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 AC011467.2-201ENST00000598425 242 ntBASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 KRT18P1-202ENST00000452408 1331 ntBASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 IGHV3-52-201ENST00000519770 353 ntBASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST2H3AQ71DI3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 AC116353.5-201ENST00000638148 1699 ntBASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST2H3AQ71DI3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms