Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 AC011467.2-201ENST00000598425 242 ntBASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF549Q6P9A3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 TOB2P1-201ENST00000469761 992 ntBASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 AC009533.2-201ENST00000543664 586 ntBASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF549Q6P9A3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF549Q6P9A3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 VENTXP7-201ENST00000475503 772 ntBASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 NPAP1P7-201ENST00000613027 823 ntBASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 AC009053.2-201ENST00000563701 2365 ntBASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF549Q6P9A3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 IGHV3-47-201ENST00000425060 335 ntBASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 AC103564.2-201ENST00000432853 1299 ntBASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 KRT17P6-201ENST00000453795 1220 ntBASIC17.32■□□□□ 0.36
ZNF549Q6P9A3 IGHV3-52-201ENST00000519770 353 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms