Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 AP002383.4-201ENST00000442518 975 ntBASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 KRT17P6-201ENST00000453795 1220 ntBASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 LYSMD4-203ENST00000378904 2122 ntBASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HIST2H2AA3Q6FI13 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H2AA3Q6FI13 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 SIRPAP1-201ENST00000448467 1770 ntBASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H2AA3Q6FI13 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AC104819.1-201ENST00000504587 486 ntBASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AP000867.3-201ENST00000524675 377 ntBASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms