Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AC133963.1-201ENST00000504166 1679 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ATPAF1Q5TC12 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ATPAF1Q5TC12 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATPAF1Q5TC12 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATPAF1Q5TC12 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATPAF1Q5TC12 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 AC099343.3-201ENST00000605834 2503 ntBASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
ATPAF1Q5TC12 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 MIR1224-201ENST00000408193 85 ntBASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SPDYE13P-201ENST00000445314 798 ntBASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 AC010331.1-201ENST00000611423 582 ntBASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms