Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 MIR1238-201ENST00000408483 83 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AL158047.1-201ENST00000445918 881 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AC128688.1-201ENST00000487626 519 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AC009154.2-201ENST00000621177 724 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 CICP6-201ENST00000457191 2729 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 AC093525.9-201ENST00000624961 1746 ntBASIC11.96□□□□□ -0.49
LINC00242Q5T6M2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 AC092053.1-201ENST00000605787 1936 ntBASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00242Q5T6M2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PRORSD1P-201ENST00000295112 541 ntBASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 INGX-201ENST00000359239 846 ntBASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC112698.1-201ENST00000510299 916 ntBASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms