Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 AL691432.3-201ENST00000621860 400 ntBASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 AL353593.2-201ENST00000602529 1483 ntBASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 AC133963.1-201ENST00000504166 1679 ntBASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
LDLRAP1Q5SW96 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 RBM17P3-201ENST00000417687 1192 ntBASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 REXO1L6P-202ENST00000619970 1078 ntBASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 AP000867.4-201ENST00000641616 219 ntBASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 AL355312.1-201ENST00000407115 2176 ntBASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDLRAP1Q5SW96 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
LDLRAP1Q5SW96 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LDLRAP1Q5SW96 KRT8P10-201ENST00000450021 1447 ntBASIC17.39■□□□□ 0.38
LDLRAP1Q5SW96 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 SAPCD2P3-201ENST00000455031 850 ntBASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 AC106795.1-205ENST00000512851 1056 ntBASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDLRAP1Q5SW96 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 AP005117.1-201ENST00000584346 1413 ntBASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 AC124067.4-201ENST00000519691 2379 ntBASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDLRAP1Q5SW96 PMPCAP1-201ENST00000508114 1576 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms