Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 AL133338.1-201ENST00000565695 1517 ntBASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SPTLC1P1-201ENST00000447199 261 ntBASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 RARRES2P8-201ENST00000566335 367 ntBASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 TP53TG3HP-202ENST00000569755 579 ntBASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO4Q2I0M5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 STK19B-204ENST00000512515 211 ntBASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 MIR4525-201ENST00000580000 75 ntBASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO4Q2I0M5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC132938.6-201ENST00000623828 1655 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC004408.2-201ENST00000623613 2777 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms