Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 AC097637.2-201ENST00000624096 1997 ntBASIC19.42■□□□□ 0.7
ECM1Q16610 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.42■□□□□ 0.7
ECM1Q16610 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ECM1Q16610 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.41■□□□□ 0.7
ECM1Q16610 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 AC004870.1-201ENST00000315132 882 ntBASIC19.41■□□□□ 0.7
ECM1Q16610 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.41■□□□□ 0.7
ECM1Q16610 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.41■□□□□ 0.7
ECM1Q16610 MTDHP4-201ENST00000600287 670 ntBASIC19.41■□□□□ 0.7
ECM1Q16610 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 AL022326.1-202ENST00000641533 845 ntBASIC19.41■□□□□ 0.7
ECM1Q16610 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 AP001094.4-201ENST00000579008 2176 ntBASIC19.41■□□□□ 0.7
ECM1Q16610 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ECM1Q16610 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ECM1Q16610 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ECM1Q16610 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.41■□□□□ 0.7
ECM1Q16610 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECM1Q16610 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
ECM1Q16610 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
ECM1Q16610 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ECM1Q16610 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.4■□□□□ 0.7
ECM1Q16610 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.4■□□□□ 0.7
ECM1Q16610 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.4■□□□□ 0.7
ECM1Q16610 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.4■□□□□ 0.7
ECM1Q16610 AP002469.2-201ENST00000531724 424 ntBASIC19.4■□□□□ 0.7
ECM1Q16610 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.4■□□□□ 0.7
ECM1Q16610 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.4■□□□□ 0.7
ECM1Q16610 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ECM1Q16610 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECM1Q16610 AC093525.9-201ENST00000624961 1746 ntBASIC19.39■□□□□ 0.7
ECM1Q16610 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ECM1Q16610 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.39■□□□□ 0.69
ECM1Q16610 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ECM1Q16610 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.39■□□□□ 0.69
ECM1Q16610 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 LINC00982-205ENST00000420957 435 ntBASIC19.39■□□□□ 0.69
ECM1Q16610 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.39■□□□□ 0.69
ECM1Q16610 FAM197Y8-203ENST00000450145 560 ntBASIC19.39■□□□□ 0.69
ECM1Q16610 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ECM1Q16610 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.39■□□□□ 0.69
ECM1Q16610 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.39■□□□□ 0.69
ECM1Q16610 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.39■□□□□ 0.69
ECM1Q16610 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.39■□□□□ 0.69
ECM1Q16610 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.39■□□□□ 0.69
ECM1Q16610 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.39■□□□□ 0.69
ECM1Q16610 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.39■□□□□ 0.69
ECM1Q16610 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.39■□□□□ 0.69
ECM1Q16610 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECM1Q16610 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECM1Q16610 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms