Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE4BQ07343 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE4BQ07343 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE4BQ07343 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PDE4BQ07343 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE4BQ07343 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PDE4BQ07343 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 AL355312.1-201ENST00000407115 2176 ntBASIC20.65■□□□□ 0.9
PDE4BQ07343 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE4BQ07343 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE4BQ07343 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.65■□□□□ 0.9
PDE4BQ07343 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE4BQ07343 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
PDE4BQ07343 AC008735.5-201ENST00000623544 497 ntBASIC20.65■□□□□ 0.9
PDE4BQ07343 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
PDE4BQ07343 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE4BQ07343 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE4BQ07343 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE4BQ07343 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.64■□□□□ 0.9
PDE4BQ07343 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE4BQ07343 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE4BQ07343 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PDE4BQ07343 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE4BQ07343 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDE4BQ07343 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE4BQ07343 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 AL590627.1-203ENST00000421194 1026 ntBASIC20.64■□□□□ 0.89
PDE4BQ07343 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE4BQ07343 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE4BQ07343 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE4BQ07343 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE4BQ07343 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.64■□□□□ 0.89
PDE4BQ07343 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PDE4BQ07343 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 AL139327.4-201ENST00000612362 153 ntBASIC20.64■□□□□ 0.89
PDE4BQ07343 BX640515.1-201ENST00000617215 977 ntBASIC20.64■□□□□ 0.89
PDE4BQ07343 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDE4BQ07343 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PDE4BQ07343 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE4BQ07343 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.63■□□□□ 0.89
PDE4BQ07343 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 NCF1C-201ENST00000438382 1427 ntBASIC20.63■□□□□ 0.89
PDE4BQ07343 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDE4BQ07343 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.63■□□□□ 0.89
PDE4BQ07343 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.63■□□□□ 0.89
PDE4BQ07343 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.63■□□□□ 0.89
PDE4BQ07343 AC006557.2-201ENST00000592985 1240 ntBASIC20.63■□□□□ 0.89
PDE4BQ07343 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 AC133963.1-201ENST00000504166 1679 ntBASIC20.63■□□□□ 0.89
PDE4BQ07343 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
PDE4BQ07343 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE4BQ07343 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE4BQ07343 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE4BQ07343 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AC243591.1-201ENST00000452967 1364 ntBASIC20.62■□□□□ 0.89
PDE4BQ07343 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms