Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FAM197Y1-201ENST00000421178 764 ntBASIC14.8□□□□□ -0.04
SSBP1Q04837 SEC1P-202ENST00000473944 940 ntBASIC14.8□□□□□ -0.04
SSBP1Q04837 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 NUDT16P1-203ENST00000513809 620 ntBASIC14.8□□□□□ -0.04
SSBP1Q04837 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.8□□□□□ -0.04
SSBP1Q04837 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP1Q04837 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 KRT89P-201ENST00000620027 1478 ntBASIC14.8□□□□□ -0.04
SSBP1Q04837 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSBP1Q04837 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SSBP1Q04837 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.79□□□□□ -0.04
SSBP1Q04837 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP1Q04837 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP1Q04837 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP1Q04837 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP1Q04837 CD177P1-201ENST00000606252 935 ntBASIC14.79□□□□□ -0.04
SSBP1Q04837 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSBP1Q04837 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP1Q04837 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSBP1Q04837 AL596257.1-201ENST00000641463 2694 ntBASIC14.79□□□□□ -0.04
SSBP1Q04837 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP1Q04837 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP1Q04837 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSBP1Q04837 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSBP1Q04837 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 AP002490.2-201ENST00000524791 560 ntBASIC14.78□□□□□ -0.04
SSBP1Q04837 BX088651.1-201ENST00000540551 451 ntBASIC14.78□□□□□ -0.04
SSBP1Q04837 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 AC104771.1-201ENST00000603335 964 ntBASIC14.78□□□□□ -0.04
SSBP1Q04837 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP1Q04837 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.78□□□□□ -0.04
SSBP1Q04837 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSBP1Q04837 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP1Q04837 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP1Q04837 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SSBP1Q04837 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP1Q04837 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP1Q04837 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms