Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AL845331.1-201ENST00000424978 1190 ntBASIC16.85■□□□□ 0.29
HMGCS1Q01581 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 KRT18P35-201ENST00000510488 1269 ntBASIC16.85■□□□□ 0.29
HMGCS1Q01581 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AC011498.5-201ENST00000592027 486 ntBASIC16.85■□□□□ 0.29
HMGCS1Q01581 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AC060834.1-201ENST00000443027 2032 ntBASIC16.85■□□□□ 0.29
HMGCS1Q01581 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 AL121761.2-201ENST00000598007 1648 ntBASIC16.85■□□□□ 0.29
HMGCS1Q01581 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 AL445228.2-201ENST00000605589 952 ntBASIC16.84■□□□□ 0.29
HMGCS1Q01581 IGHV3-41-201ENST00000613121 348 ntBASIC16.84■□□□□ 0.29
HMGCS1Q01581 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 AC116353.5-201ENST00000638148 1699 ntBASIC16.84■□□□□ 0.29
HMGCS1Q01581 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HMGCS1Q01581 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS1Q01581 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.83■□□□□ 0.29
HMGCS1Q01581 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
HMGCS1Q01581 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
HMGCS1Q01581 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCS1Q01581 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCS1Q01581 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCS1Q01581 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCS1Q01581 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCS1Q01581 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AC125634.1-201ENST00000438758 1403 ntBASIC16.83■□□□□ 0.28
HMGCS1Q01581 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AL136038.3-201ENST00000561909 1096 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms