Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.39□□□□□ -0.43
RPL39P62891 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.39□□□□□ -0.43
RPL39P62891 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.39□□□□□ -0.43
RPL39P62891 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.39□□□□□ -0.43
RPL39P62891 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RPL39P62891 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RPL39P62891 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RPL39P62891 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RPL39P62891 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 RNF216P1-203ENST00000404404 2427 ntBASIC12.38□□□□□ -0.43
RPL39P62891 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.38□□□□□ -0.43
RPL39P62891 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RPL39P62891 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.38□□□□□ -0.43
RPL39P62891 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.38□□□□□ -0.43
RPL39P62891 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.38□□□□□ -0.43
RPL39P62891 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.38□□□□□ -0.43
RPL39P62891 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RPL39P62891 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RPL39P62891 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 AC132872.4-202ENST00000622924 2756 ntBASIC12.38□□□□□ -0.43
RPL39P62891 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPL39P62891 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RPL39P62891 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 AC046185.3-201ENST00000623228 1824 ntBASIC12.37□□□□□ -0.43
RPL39P62891 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 AL662844.4-201ENST00000606367 2838 ntBASIC12.37□□□□□ -0.43
RPL39P62891 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 KRT18P29-201ENST00000397031 1267 ntBASIC12.37□□□□□ -0.43
RPL39P62891 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
RPL39P62891 KRT18P6-201ENST00000555540 1265 ntBASIC12.37□□□□□ -0.43
RPL39P62891 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 AC008687.5-201ENST00000593746 558 ntBASIC12.37□□□□□ -0.43
RPL39P62891 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms