Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBE2D3P61077 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 STARP1-201ENST00000397973 869 ntBASIC12.48□□□□□ -0.41
UBE2D3P61077 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2D3P61077 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 TSPY12P-201ENST00000421279 868 ntBASIC12.48□□□□□ -0.41
UBE2D3P61077 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 HLA-F-220ENST00000434407 884 ntBASIC12.48□□□□□ -0.41
UBE2D3P61077 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.48□□□□□ -0.41
UBE2D3P61077 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2D3P61077 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2D3P61077 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 AC004263.2-201ENST00000617183 678 ntBASIC12.48□□□□□ -0.41
UBE2D3P61077 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBE2D3P61077 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D3P61077 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D3P61077 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
UBE2D3P61077 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D3P61077 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBE2D3P61077 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D3P61077 AC105020.1-201ENST00000435356 2205 ntBASIC12.47□□□□□ -0.41
UBE2D3P61077 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 CROCCP2-202ENST00000412962 2773 ntBASIC12.47□□□□□ -0.41
UBE2D3P61077 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
UBE2D3P61077 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2D3P61077 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2D3P61077 SPDYE15P-201ENST00000424157 909 ntBASIC12.47□□□□□ -0.41
UBE2D3P61077 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.47□□□□□ -0.41
UBE2D3P61077 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.47□□□□□ -0.41
UBE2D3P61077 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
UBE2D3P61077 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2D3P61077 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D3P61077 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
UBE2D3P61077 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D3P61077 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D3P61077 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 CROCCP1-201ENST00000426910 5675 ntBASIC12.46□□□□□ -0.41
UBE2D3P61077 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2D3P61077 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.46□□□□□ -0.41
UBE2D3P61077 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D3P61077 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D3P61077 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms