Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SMIM11AP58511 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.12■□□□□ 0.17
SMIM11AP58511 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
SMIM11AP58511 HLA-F-220ENST00000434407 884 ntBASIC16.12■□□□□ 0.17
SMIM11AP58511 MTCL1P1-201ENST00000446207 792 ntBASIC16.12■□□□□ 0.17
SMIM11AP58511 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SMIM11AP58511 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.12■□□□□ 0.17
SMIM11AP58511 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.12■□□□□ 0.17
SMIM11AP58511 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMIM11AP58511 AC060834.1-201ENST00000443027 2032 ntBASIC16.12■□□□□ 0.17
SMIM11AP58511 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
SMIM11AP58511 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SMIM11AP58511 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMIM11AP58511 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.12■□□□□ 0.17
SMIM11AP58511 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM11AP58511 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM11AP58511 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SMIM11AP58511 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM11AP58511 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM11AP58511 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM11AP58511 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SMIM11AP58511 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SMIM11AP58511 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.11■□□□□ 0.17
SMIM11AP58511 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SMIM11AP58511 AL138966.2-201ENST00000621997 464 ntBASIC16.11■□□□□ 0.17
SMIM11AP58511 AC079602.3-201ENST00000623931 403 ntBASIC16.11■□□□□ 0.17
SMIM11AP58511 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.11■□□□□ 0.17
SMIM11AP58511 AC097374.2-201ENST00000618617 1306 ntBASIC16.11■□□□□ 0.17
SMIM11AP58511 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMIM11AP58511 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM11AP58511 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMIM11AP58511 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SMIM11AP58511 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 AP003733.1-201ENST00000491725 852 ntBASIC16.1■□□□□ 0.17
SMIM11AP58511 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms