Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BX005266.1-201ENST00000473402 457 ntBASIC16.74■□□□□ 0.27
VSX2P58304 RNPS1P1-201ENST00000507437 918 ntBASIC16.74■□□□□ 0.27
VSX2P58304 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
VSX2P58304 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.74■□□□□ 0.27
VSX2P58304 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.74■□□□□ 0.27
VSX2P58304 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.74■□□□□ 0.27
VSX2P58304 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 AC079776.2-201ENST00000641154 1609 ntBASIC16.74■□□□□ 0.27
VSX2P58304 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 AC004817.3-201ENST00000602957 2129 ntBASIC16.73■□□□□ 0.27
VSX2P58304 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VSX2P58304 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.73■□□□□ 0.27
VSX2P58304 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 AC005104.2-201ENST00000427818 678 ntBASIC16.73■□□□□ 0.27
VSX2P58304 KRT18P67-201ENST00000432816 1264 ntBASIC16.73■□□□□ 0.27
VSX2P58304 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.73■□□□□ 0.27
VSX2P58304 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 AL662844.1-201ENST00000546340 181 ntBASIC16.73■□□□□ 0.27
VSX2P58304 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.73■□□□□ 0.27
VSX2P58304 AC021087.4-201ENST00000563761 564 ntBASIC16.73■□□□□ 0.27
VSX2P58304 SLC25A6P4-201ENST00000586535 553 ntBASIC16.73■□□□□ 0.27
VSX2P58304 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 AC064862.7-201ENST00000604520 867 ntBASIC16.73■□□□□ 0.27
VSX2P58304 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 AC148477.8-201ENST00000624298 468 ntBASIC16.73■□□□□ 0.27
VSX2P58304 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.73■□□□□ 0.27
VSX2P58304 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSX2P58304 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.73■□□□□ 0.27
VSX2P58304 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 AL355312.1-201ENST00000407115 2176 ntBASIC16.72■□□□□ 0.27
VSX2P58304 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VSX2P58304 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VSX2P58304 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 AC003669.1-201ENST00000334569 611 ntBASIC16.72■□□□□ 0.27
VSX2P58304 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 SPDYE21P-201ENST00000413323 827 ntBASIC16.72■□□□□ 0.27
VSX2P58304 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VSX2P58304 STK19B-204ENST00000512515 211 ntBASIC16.72■□□□□ 0.27
VSX2P58304 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.72■□□□□ 0.27
VSX2P58304 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.72■□□□□ 0.27
VSX2P58304 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 LINC01451-201ENST00000623792 534 ntBASIC16.72■□□□□ 0.27
VSX2P58304 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms