Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXG1P55316 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 AC106820.2-201ENST00000563775 3264 ntBASIC15.31■□□□□ 0.04
FOXG1P55316 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXG1P55316 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXG1P55316 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FOXG1P55316 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXG1P55316 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FOXG1P55316 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FOXG1P55316 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXG1P55316 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXG1P55316 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXG1P55316 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXG1P55316 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXG1P55316 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 AC243591.1-201ENST00000452967 1364 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXG1P55316 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXG1P55316 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 AL662844.1-201ENST00000546340 181 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXG1P55316 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXG1P55316 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXG1P55316 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
FOXG1P55316 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXG1P55316 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FOXG1P55316 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 AL135999.2-201ENST00000622438 1686 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 AC097637.2-201ENST00000624096 1997 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.3■□□□□ 0.04
FOXG1P55316 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXG1P55316 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FOXG1P55316 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXG1P55316 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXG1P55316 AC107918.4-202ENST00000641623 219 ntBASIC15.29■□□□□ 0.04
FOXG1P55316 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXG1P55316 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FOXG1P55316 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXG1P55316 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXG1P55316 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXG1P55316 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXG1P55316 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 AP002414.3-201ENST00000589352 1468 ntBASIC15.28■□□□□ 0.04
FOXG1P55316 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FOXG1P55316 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms