Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PDE1AP54750 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDE1AP54750 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDE1AP54750 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDE1AP54750 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDE1AP54750 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.31■■□□□ 1
PDE1AP54750 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.31■■□□□ 1
PDE1AP54750 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDE1AP54750 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.31■■□□□ 1
PDE1AP54750 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.31■■□□□ 1
PDE1AP54750 NUS1P1-201ENST00000446295 882 ntBASIC21.31■■□□□ 1
PDE1AP54750 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.31■■□□□ 1
PDE1AP54750 AL591684.3-201ENST00000605187 298 ntBASIC21.31■■□□□ 1
PDE1AP54750 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.31■■□□□ 1
PDE1AP54750 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PDE1AP54750 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
PDE1AP54750 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDE1AP54750 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDE1AP54750 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.3■■□□□ 1
PDE1AP54750 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.3■■□□□ 1
PDE1AP54750 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.3■■□□□ 1
PDE1AP54750 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.3■■□□□ 1
PDE1AP54750 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PDE1AP54750 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.3■■□□□ 1
PDE1AP54750 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.3■■□□□ 1
PDE1AP54750 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PDE1AP54750 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.3■■□□□ 1
PDE1AP54750 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE1AP54750 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 LINC02012-201ENST00000608206 1725 ntBASIC21.29■■□□□ 1
PDE1AP54750 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.29■■□□□ 1
PDE1AP54750 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
PDE1AP54750 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.29■■□□□ 1
PDE1AP54750 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PDE1AP54750 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 SPDYE21P-201ENST00000413323 827 ntBASIC21.29■■□□□ 1
PDE1AP54750 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.29■■□□□ 1
PDE1AP54750 AC132008.2-207ENST00000454517 770 ntBASIC21.29■■□□□ 1
PDE1AP54750 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.29■■□□□ 1
PDE1AP54750 MIR3652-201ENST00000579335 131 ntBASIC21.29■■□□□ 1
PDE1AP54750 AP001269.4-201ENST00000609611 512 ntBASIC21.29■■□□□ 1
PDE1AP54750 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 AC060834.1-201ENST00000443027 2032 ntBASIC21.29■■□□□ 1
PDE1AP54750 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDE1AP54750 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PDE1AP54750 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDE1AP54750 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDE1AP54750 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDE1AP54750 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDE1AP54750 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.28■■□□□ 1
PDE1AP54750 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms