Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC009336.1-201ENST00000608941 1553 ntBASIC19.34■□□□□ 0.69
BRCA2P51587 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BRCA2P51587 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
BRCA2P51587 KRT17P7-201ENST00000451704 1104 ntBASIC19.34■□□□□ 0.69
BRCA2P51587 AC119751.2-201ENST00000504529 210 ntBASIC19.34■□□□□ 0.69
BRCA2P51587 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.33■□□□□ 0.69
BRCA2P51587 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.33■□□□□ 0.69
BRCA2P51587 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.33■□□□□ 0.69
BRCA2P51587 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRCA2P51587 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCA2P51587 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCA2P51587 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.33■□□□□ 0.68
BRCA2P51587 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCA2P51587 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCA2P51587 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCA2P51587 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCA2P51587 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BRCA2P51587 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCA2P51587 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCA2P51587 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.32■□□□□ 0.68
BRCA2P51587 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCA2P51587 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCA2P51587 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCA2P51587 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCA2P51587 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 AC138969.3-201ENST00000546612 1459 ntBASIC19.32■□□□□ 0.68
BRCA2P51587 AC138932.2-201ENST00000548268 1459 ntBASIC19.32■□□□□ 0.68
BRCA2P51587 AC126755.4-201ENST00000549796 1459 ntBASIC19.32■□□□□ 0.68
BRCA2P51587 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.32■□□□□ 0.68
BRCA2P51587 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCA2P51587 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCA2P51587 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BRCA2P51587 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCA2P51587 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BRCA2P51587 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 LINC00982-205ENST00000420957 435 ntBASIC19.31■□□□□ 0.68
BRCA2P51587 AC009477.1-201ENST00000452936 217 ntBASIC19.31■□□□□ 0.68
BRCA2P51587 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 AL512384.1-201ENST00000406683 331 ntBASIC19.31■□□□□ 0.68
BRCA2P51587 SLC25A6P2-201ENST00000497974 877 ntBASIC19.31■□□□□ 0.68
BRCA2P51587 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 FAM86C2P-203ENST00000528684 1004 ntBASIC19.31■□□□□ 0.68
BRCA2P51587 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.31■□□□□ 0.68
BRCA2P51587 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
BRCA2P51587 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
BRCA2P51587 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCA2P51587 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BRCA2P51587 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.31■□□□□ 0.68
BRCA2P51587 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.31■□□□□ 0.68
BRCA2P51587 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCA2P51587 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.3■□□□□ 0.68
BRCA2P51587 AC132938.2-201ENST00000579188 680 ntBASIC19.3■□□□□ 0.68
BRCA2P51587 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 AL591163.1-201ENST00000641757 987 ntBASIC19.3■□□□□ 0.68
BRCA2P51587 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCA2P51587 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCA2P51587 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRCA2P51587 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms