Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SLC1A6P48664 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A6P48664 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 AC010947.1-201ENST00000623454 693 ntBASIC17.2■□□□□ 0.34
SLC1A6P48664 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLC1A6P48664 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC1A6P48664 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A6P48664 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A6P48664 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A6P48664 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 RNF216P1-203ENST00000404404 2427 ntBASIC17.19■□□□□ 0.34
SLC1A6P48664 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 MIR718-201ENST00000390190 70 ntBASIC17.19■□□□□ 0.34
SLC1A6P48664 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC1A6P48664 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC1A6P48664 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC1A6P48664 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SLC1A6P48664 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SLC1A6P48664 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC1A6P48664 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A6P48664 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A6P48664 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A6P48664 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A6P48664 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC1A6P48664 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC1A6P48664 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 AC034232.1-201ENST00000506026 1064 ntBASIC17.18■□□□□ 0.34
SLC1A6P48664 AC008550.1-201ENST00000511500 884 ntBASIC17.18■□□□□ 0.34
SLC1A6P48664 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A6P48664 NAPSB-206ENST00000562112 1266 ntBASIC17.18■□□□□ 0.34
SLC1A6P48664 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 KRT8P9-201ENST00000558927 1449 ntBASIC17.18■□□□□ 0.34
SLC1A6P48664 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A6P48664 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 AC008894.3-201ENST00000624324 3103 ntBASIC17.18■□□□□ 0.34
SLC1A6P48664 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC1A6P48664 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A6P48664 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms