Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC6A12P48065 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC6A12P48065 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A12P48065 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A12P48065 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A12P48065 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A12P48065 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A12P48065 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A12P48065 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A12P48065 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC6A12P48065 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A12P48065 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A12P48065 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 SPDYE21P-201ENST00000413323 827 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A12P48065 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A12P48065 ABCD1P5-201ENST00000445663 754 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 KRT16P4-201ENST00000453883 522 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A12P48065 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A12P48065 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A12P48065 AC138932.1-201ENST00000534164 6830 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A12P48065 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A12P48065 AC138894.3-201ENST00000603787 634 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A12P48065 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SLC6A12P48065 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A12P48065 AC148477.5-201ENST00000625164 1645 ntBASIC16.83■□□□□ 0.28
SLC6A12P48065 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A12P48065 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A12P48065 SIGLEC16-201ENST00000599858 1437 ntBASIC16.82■□□□□ 0.28
SLC6A12P48065 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC6A12P48065 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A12P48065 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A12P48065 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A12P48065 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A12P48065 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms