Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA4P43681 AC046185.3-201ENST00000623228 1824 ntBASIC17.63■□□□□ 0.41
CHRNA4P43681 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA4P43681 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.63■□□□□ 0.41
CHRNA4P43681 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA4P43681 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA4P43681 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA4P43681 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA4P43681 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA4P43681 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CHRNA4P43681 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA4P43681 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 MYCLP1-201ENST00000372451 1075 ntBASIC17.62■□□□□ 0.41
CHRNA4P43681 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA4P43681 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CHRNA4P43681 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA4P43681 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA4P43681 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA4P43681 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA4P43681 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA4P43681 AL732292.2-201ENST00000609649 430 ntBASIC17.62■□□□□ 0.41
CHRNA4P43681 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 AC073592.5-201ENST00000624854 528 ntBASIC17.62■□□□□ 0.41
CHRNA4P43681 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.62■□□□□ 0.41
CHRNA4P43681 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA4P43681 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA4P43681 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA4P43681 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA4P43681 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA4P43681 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHRNA4P43681 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHRNA4P43681 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA4P43681 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA4P43681 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA4P43681 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.61■□□□□ 0.41
CHRNA4P43681 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.61■□□□□ 0.41
CHRNA4P43681 AL591684.3-201ENST00000605187 298 ntBASIC17.61■□□□□ 0.41
CHRNA4P43681 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA4P43681 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA4P43681 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA4P43681 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA4P43681 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA4P43681 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA4P43681 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA4P43681 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRNA4P43681 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA4P43681 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRNA4P43681 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA4P43681 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRNA4P43681 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA4P43681 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 PMPCAP1-201ENST00000508114 1576 ntBASIC17.6■□□□□ 0.41
CHRNA4P43681 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA4P43681 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA4P43681 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA4P43681 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA4P43681 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA4P43681 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms