Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MTHFRP42898 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 PHGDH-209ENST00000641074 1780 ntBASIC18.23■□□□□ 0.51
MTHFRP42898 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.23■□□□□ 0.51
MTHFRP42898 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.23■□□□□ 0.51
MTHFRP42898 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.23■□□□□ 0.51
MTHFRP42898 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 AC092474.2-201ENST00000424288 719 ntBASIC18.23■□□□□ 0.51
MTHFRP42898 AC244107.1-201ENST00000442033 332 ntBASIC18.23■□□□□ 0.51
MTHFRP42898 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.23■□□□□ 0.51
MTHFRP42898 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.23■□□□□ 0.51
MTHFRP42898 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.23■□□□□ 0.51
MTHFRP42898 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 AC116407.2-201ENST00000613639 860 ntBASIC18.23■□□□□ 0.51
MTHFRP42898 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MTHFRP42898 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MTHFRP42898 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MTHFRP42898 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MTHFRP42898 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 AC004461.1-201ENST00000412461 403 ntBASIC18.22■□□□□ 0.51
MTHFRP42898 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 HLA-J-203ENST00000494367 1087 ntBASIC18.22■□□□□ 0.51
MTHFRP42898 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.22■□□□□ 0.51
MTHFRP42898 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.22■□□□□ 0.51
MTHFRP42898 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.22■□□□□ 0.51
MTHFRP42898 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.22■□□□□ 0.51
MTHFRP42898 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.22■□□□□ 0.51
MTHFRP42898 AC068137.2-201ENST00000605408 478 ntBASIC18.22■□□□□ 0.51
MTHFRP42898 AC105339.1-204ENST00000636249 355 ntBASIC18.22■□□□□ 0.51
MTHFRP42898 AC092902.6-201ENST00000641783 218 ntBASIC18.22■□□□□ 0.51
MTHFRP42898 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MTHFRP42898 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MTHFRP42898 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MTHFRP42898 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MTHFRP42898 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.21■□□□□ 0.51
MTHFRP42898 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MTHFRP42898 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.21■□□□□ 0.51
MTHFRP42898 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MTHFRP42898 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.21■□□□□ 0.51
MTHFRP42898 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.21■□□□□ 0.51
MTHFRP42898 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.21■□□□□ 0.51
MTHFRP42898 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MTHFRP42898 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.21■□□□□ 0.51
MTHFRP42898 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.21■□□□□ 0.51
MTHFRP42898 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.21■□□□□ 0.51
MTHFRP42898 REXO1L3P-201ENST00000622202 1288 ntBASIC18.21■□□□□ 0.51
MTHFRP42898 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
MTHFRP42898 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MTHFRP42898 HCG11-201ENST00000411553 5696 ntBASIC18.21■□□□□ 0.51
MTHFRP42898 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.21■□□□□ 0.51
MTHFRP42898 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.21■□□□□ 0.51
MTHFRP42898 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
MTHFRP42898 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
MTHFRP42898 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
MTHFRP42898 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.2■□□□□ 0.5
MTHFRP42898 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 LINC00982-205ENST00000420957 435 ntBASIC18.2■□□□□ 0.5
MTHFRP42898 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 CXCL1P1-201ENST00000502804 216 ntBASIC18.2■□□□□ 0.5
MTHFRP42898 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms