Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 AP000997.3-201ENST00000623333 2250 ntBASIC19.41■□□□□ 0.7
HTTP42858 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.41■□□□□ 0.7
HTTP42858 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.4■□□□□ 0.7
HTTP42858 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.4■□□□□ 0.7
HTTP42858 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.4■□□□□ 0.7
HTTP42858 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 AC129492.6-201ENST00000611383 1305 ntBASIC19.4■□□□□ 0.7
HTTP42858 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HTTP42858 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HTTP42858 MIR4453-201ENST00000584019 89 ntBASIC19.4■□□□□ 0.7
HTTP42858 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.4■□□□□ 0.7
HTTP42858 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
HTTP42858 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.4■□□□□ 0.7
HTTP42858 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HTTP42858 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTTP42858 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTTP42858 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTTP42858 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTTP42858 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.39■□□□□ 0.7
HTTP42858 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.7
HTTP42858 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTTP42858 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 AP000842.3-202ENST00000569238 1080 ntBASIC19.39■□□□□ 0.69
HTTP42858 TP53TG3HP-202ENST00000569755 579 ntBASIC19.39■□□□□ 0.69
HTTP42858 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HTTP42858 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
HTTP42858 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTTP42858 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 AC241585.1-201ENST00000433527 519 ntBASIC19.39■□□□□ 0.69
HTTP42858 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.39■□□□□ 0.69
HTTP42858 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HTTP42858 AC106886.1-201ENST00000568660 600 ntBASIC19.39■□□□□ 0.69
HTTP42858 AC132938.2-201ENST00000579188 680 ntBASIC19.39■□□□□ 0.69
HTTP42858 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTTP42858 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HTTP42858 AL591163.1-201ENST00000641757 987 ntBASIC19.39■□□□□ 0.69
HTTP42858 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
HTTP42858 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.39■□□□□ 0.69
HTTP42858 UXT-AS1-201ENST00000590504 1525 ntBASIC19.39■□□□□ 0.69
HTTP42858 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.39■□□□□ 0.69
HTTP42858 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.39■□□□□ 0.69
HTTP42858 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTTP42858 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 DGCR5-201ENST00000399539 862 ntBASIC19.38■□□□□ 0.69
HTTP42858 TMEM14DP-201ENST00000422205 345 ntBASIC19.38■□□□□ 0.69
HTTP42858 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.38■□□□□ 0.69
HTTP42858 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
HTTP42858 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 REXO1L11P-201ENST00000620964 1927 ntBASIC19.38■□□□□ 0.69
HTTP42858 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HTTP42858 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.38■□□□□ 0.69
HTTP42858 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HTTP42858 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 MIR346-201ENST00000362234 95 ntBASIC19.38■□□□□ 0.69
HTTP42858 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.38■□□□□ 0.69
HTTP42858 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.38■□□□□ 0.69
HTTP42858 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.38■□□□□ 0.69
HTTP42858 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTTP42858 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.37■□□□□ 0.69
HTTP42858 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HTTP42858 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms