Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 ZNF259P1-201ENST00000407656 1365 ntBASIC16■□□□□ 0.15
RFC3P40938 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RFC3P40938 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RFC3P40938 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RFC3P40938 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16■□□□□ 0.15
RFC3P40938 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
RFC3P40938 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16■□□□□ 0.15
RFC3P40938 SPDYE21P-201ENST00000413323 827 ntBASIC16■□□□□ 0.15
RFC3P40938 AC103564.2-201ENST00000432853 1299 ntBASIC16■□□□□ 0.15
RFC3P40938 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16■□□□□ 0.15
RFC3P40938 IGHV3-22-201ENST00000520721 359 ntBASIC16■□□□□ 0.15
RFC3P40938 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16■□□□□ 0.15
RFC3P40938 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16■□□□□ 0.15
RFC3P40938 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16■□□□□ 0.15
RFC3P40938 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16■□□□□ 0.15
RFC3P40938 TERC-201ENST00000602385 541 ntBASIC16■□□□□ 0.15
RFC3P40938 AC116407.2-201ENST00000613639 860 ntBASIC16■□□□□ 0.15
RFC3P40938 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16■□□□□ 0.15
RFC3P40938 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16■□□□□ 0.15
RFC3P40938 AC135050.7-201ENST00000624508 2218 ntBASIC16■□□□□ 0.15
RFC3P40938 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16■□□□□ 0.15
RFC3P40938 AC148477.5-201ENST00000625164 1645 ntBASIC16■□□□□ 0.15
RFC3P40938 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16■□□□□ 0.15
RFC3P40938 EFTUD1P1-204ENST00000560401 1798 ntBASIC16■□□□□ 0.15
RFC3P40938 AL049757.1-201ENST00000616842 1596 ntBASIC16■□□□□ 0.15
RFC3P40938 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFC3P40938 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFC3P40938 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 AC132938.5-201ENST00000624980 1813 ntBASIC15.99■□□□□ 0.15
RFC3P40938 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC3P40938 RNA5SP415-201ENST00000517246 115 ntBASIC15.99■□□□□ 0.15
RFC3P40938 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 AC105339.3-201ENST00000560043 636 ntBASIC15.99■□□□□ 0.15
RFC3P40938 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC3P40938 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RFC3P40938 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC3P40938 PKD1P1-201ENST00000458669 6805 ntBASIC15.99■□□□□ 0.15
RFC3P40938 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC3P40938 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms