Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT2P35908 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.02■□□□□ 0.8
KRT2P35908 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT2P35908 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
KRT2P35908 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT2P35908 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KRT2P35908 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT2P35908 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT2P35908 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.02■□□□□ 0.79
KRT2P35908 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT2P35908 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
KRT2P35908 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT2P35908 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT2P35908 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
KRT2P35908 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT2P35908 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT2P35908 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT2P35908 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT2P35908 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT2P35908 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 AL732292.2-201ENST00000609649 430 ntBASIC20.01■□□□□ 0.79
KRT2P35908 AL121772.3-201ENST00000610840 674 ntBASIC20.01■□□□□ 0.79
KRT2P35908 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT2P35908 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT2P35908 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KRT2P35908 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 AC116353.5-201ENST00000638148 1699 ntBASIC20■□□□□ 0.79
KRT2P35908 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20■□□□□ 0.79
KRT2P35908 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20■□□□□ 0.79
KRT2P35908 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20■□□□□ 0.79
KRT2P35908 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20■□□□□ 0.79
KRT2P35908 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRT2P35908 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
KRT2P35908 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 AC132008.2-207ENST00000454517 770 ntBASIC20■□□□□ 0.79
KRT2P35908 KRT18P31-201ENST00000506277 1292 ntBASIC20■□□□□ 0.79
KRT2P35908 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20■□□□□ 0.79
KRT2P35908 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20■□□□□ 0.79
KRT2P35908 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20■□□□□ 0.79
KRT2P35908 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KRT2P35908 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20■□□□□ 0.79
KRT2P35908 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT2P35908 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20■□□□□ 0.79
KRT2P35908 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT2P35908 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT2P35908 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRT2P35908 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT2P35908 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 TSPY19P-201ENST00000418461 509 ntBASIC19.99■□□□□ 0.79
KRT2P35908 TSPY18P-201ENST00000441642 509 ntBASIC19.99■□□□□ 0.79
KRT2P35908 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT2P35908 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT2P35908 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT2P35908 AP001269.4-201ENST00000609611 512 ntBASIC19.99■□□□□ 0.79
KRT2P35908 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT2P35908 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT2P35908 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT2P35908 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms