Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 REXO1L9P-201ENST00000604264 2108 ntBASIC19.91■□□□□ 0.78
COPB2P35606 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.91■□□□□ 0.78
COPB2P35606 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPB2P35606 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 LETM1P2-201ENST00000597330 2178 ntBASIC19.9■□□□□ 0.78
COPB2P35606 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.9■□□□□ 0.78
COPB2P35606 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.9■□□□□ 0.78
COPB2P35606 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COPB2P35606 ELL2P1-201ENST00000413990 1906 ntBASIC19.9■□□□□ 0.78
COPB2P35606 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPB2P35606 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COPB2P35606 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COPB2P35606 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.89■□□□□ 0.77
COPB2P35606 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.89■□□□□ 0.77
COPB2P35606 ACTG1P14-201ENST00000446382 1122 ntBASIC19.89■□□□□ 0.77
COPB2P35606 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.89■□□□□ 0.77
COPB2P35606 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
COPB2P35606 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COPB2P35606 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.89■□□□□ 0.77
COPB2P35606 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.89■□□□□ 0.77
COPB2P35606 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.89■□□□□ 0.77
COPB2P35606 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COPB2P35606 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COPB2P35606 AC004877.2-201ENST00000623941 599 ntBASIC19.89■□□□□ 0.77
COPB2P35606 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPB2P35606 BCL2-203ENST00000589955 5011 ntBASIC19.88■□□□□ 0.77
COPB2P35606 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
COPB2P35606 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 BCAR1-209ENST00000546196 1340 ntBASIC19.88■□□□□ 0.77
COPB2P35606 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.88■□□□□ 0.77
COPB2P35606 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.88■□□□□ 0.77
COPB2P35606 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.88■□□□□ 0.77
COPB2P35606 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPB2P35606 KRT19P2-202ENST00000557173 1012 ntBASIC19.88■□□□□ 0.77
COPB2P35606 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.88■□□□□ 0.77
COPB2P35606 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.88■□□□□ 0.77
COPB2P35606 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 OR7E47P-204ENST00000575924 449 ntBASIC19.88■□□□□ 0.77
COPB2P35606 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.88■□□□□ 0.77
COPB2P35606 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 AC023141.13-201ENST00000604991 943 ntBASIC19.88■□□□□ 0.77
COPB2P35606 AL596442.2-201ENST00000610240 980 ntBASIC19.88■□□□□ 0.77
COPB2P35606 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.88■□□□□ 0.77
COPB2P35606 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms