Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.42■□□□□ 0.54
PCK1P35558 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 AC005336.2-201ENST00000593183 939 ntBASIC18.42■□□□□ 0.54
PCK1P35558 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCK1P35558 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 AC011270.2-201ENST00000624293 2550 ntBASIC18.42■□□□□ 0.54
PCK1P35558 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCK1P35558 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PCK1P35558 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.42■□□□□ 0.54
PCK1P35558 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCK1P35558 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.41■□□□□ 0.54
PCK1P35558 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 AL023806.1-201ENST00000603994 1649 ntBASIC18.41■□□□□ 0.54
PCK1P35558 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.41■□□□□ 0.54
PCK1P35558 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 PCED1CP-201ENST00000419887 785 ntBASIC18.41■□□□□ 0.54
PCK1P35558 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.41■□□□□ 0.54
PCK1P35558 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.41■□□□□ 0.54
PCK1P35558 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.41■□□□□ 0.54
PCK1P35558 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCK1P35558 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PCK1P35558 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.41■□□□□ 0.54
PCK1P35558 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCK1P35558 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCK1P35558 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCK1P35558 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCK1P35558 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.4■□□□□ 0.54
PCK1P35558 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.4■□□□□ 0.54
PCK1P35558 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.4■□□□□ 0.54
PCK1P35558 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.4■□□□□ 0.54
PCK1P35558 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.4■□□□□ 0.54
PCK1P35558 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCK1P35558 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCK1P35558 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.4■□□□□ 0.54
PCK1P35558 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCK1P35558 AC108860.2-201ENST00000562760 2183 ntBASIC18.4■□□□□ 0.54
PCK1P35558 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCK1P35558 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.39■□□□□ 0.54
PCK1P35558 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCK1P35558 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms